BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H05SP1|AL425774
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig971 1452 0.0
>3x_Contig971
Length = 3245
Score = 1452 bits (727), Expect = 0.0
Identities = 750/764 (98%)
Strand = Plus / Minus
Query: 2 ccagtactagtacgtggcgaagtgacagayagattttgttcatgbgttgcagcagctaga 61
||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||
Sbjct: 2783 ccagtactagtacgtggcgaagtgacagacagatttcgttcatgcgttgcagcagccaga 2724
Query: 62 ggtgtggctgggattyctggttgtttgagtgaaccatgttttctaatggaaccatgacgt 121
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2723 ggtgtggctgggattcctggttgtttgagtgaaccatgtcttctaatggaaccatgacgt 2664
Query: 122 gatggtattgacaattgttttctatgggagtttgctgttgagctgtttgattycaatgaa 181
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2663 gatggtattgacaattgttttctatgggagtttgctgttgagctgtttgattccaatgaa 2604
Query: 182 gaagtttcattaataacaatagaaggatgcctaccgtggtttggaggctgctcttgagat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 gaagtttcattaataacaatagaaggatgcctaccgtggtttggaggctgctcttgagat 2544
Query: 242 acgtaagattgtttgtkacagcagataaaaccgccttttacttctgtwaattcgatgttt 301
|||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2543 acgtaagattgtctgtgacagcagataaaaccgccttttacttctgtaaattcgatgttt 2484
Query: 302 aactttttcaacgtactaataatcttgtatctwacgacaggtaatggtttagaagatgtt 361
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2483 aactttttcaacgtactaataatcttgtatctaacgacaggtaatggtttagaagatgtt 2424
Query: 362 gtttggacagagaaaaagccttttaggaataaagaacgtgggaagtcgatcgatggnatt 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2423 gtttggacagagaaaaagccttttaggaataaagaacgtgggaagtcgatcgatggcatt 2364
Query: 422 gaacctggaggagctttggatgctctttcaataatttgttcatcagttagttcttcccag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 gaacctggaggagctttggatgctctttcaataatttgttcatcagttagttcttcccag 2304
Query: 482 ggtgatatgtcgtctatytggagtgcgttgccttctgagcttgattgcaggaagccatca 541
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303 ggtgatatgtcgtctatctggagtgcgttgccttctgagcttgattgcaggaagccatca 2244
Query: 542 tcgttagtattaatacgacctggtgcagttgaaccatcgctggaagtattggcagcagaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 tcgttagtattaatacgacctggtgcagttgaaccatcgctggaagtattggcagcagaa 2184
Query: 602 gttgttaatacaggaggacgattatactttaatgactcacgacgtgcatgccccacagac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2183 gttgttaatacaggaggacgattatactttaatgactcacgacgtgcatgccccacagac 2124
Query: 662 ttagcccttgcacttggatggagtttctttcctttaggcagagacaaaagagcaagtggt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2123 ttagcccttgcacttggatggagtttctttcctttaggcagagacaaaagagcaagtggt 2064
Query: 722 tggttttcgtcatatttagtggattgagtytcagattcatcatc 765
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2063 tggttttcgtcatatttagtggattgagtctcagattcatcatc 2020
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4631
Number of Sequences: 1807
Number of extensions: 4631
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)